SUPERFAMILY 1.75 HMM library and genome assignments server

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Centromere-binding family domain assignments
in
Daphnia pulex


No domain assignments for these genomes.


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View all assignments containing a Centromere-binding domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   349 349
No Yes Homo sapiens 76_38 Human 2 1
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 2 1
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 1 1
No Yes Papio anubis 76 Olive baboon 2 1
No Yes Otolemur garnettii 76_3 Small-eared galago 2 1
No Yes Rattus norvegicus 76_5.0 Norway rat 2 1
No Yes Mus musculus 76_38 House mouse 2 1
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 2 1
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 1 1
No Yes Cavia porcellus 76_3 Domestic guinea pig 1 1
No Yes Bos taurus 76_3.1 Cattle 1 1
No Yes Ovis aries 76_3.1 Sheep 1 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 2 1
No Yes Ailuropoda melanoleuca 76_1 Giant panda 1 1
No Yes Procavia capensis 76_1 Cape rock hyrax 2 1
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 2 1
No Yes Ornithorhynchus anatinus 76_5 Platypus 2 1
No Yes Schizosaccharomyces pombe Fission yeast 2 1
No Yes Schizosaccharomyces pombe 972h-   2 1
No Yes Homo sapiens 75_37 (old version GRC) Human 2 1
No Yes Homo sapiens (NCBI version) Human 2 1
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 2 1
No Yes Homo sapiens 69_37 Human 2 1
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 2 1
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 1 1
No Yes Otolemur garnettii 69_3 Small-eared galago 2 1
No Yes Rattus norvegicus 69_3.4 Norway rat 2 1
No Yes Mus musculus 69_38 House mouse 2 1
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 2 1
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 1 1
No Yes Cavia porcellus 69_3 Domestic guinea pig 1 1
No Yes Bos taurus 69_3.1 Cattle 1 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 2 1
No Yes Ailuropoda melanoleuca 69_1 Giant panda 1 1
No Yes Procavia capensis 69_1 Cape rock hyrax 2 1
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 2 1
No Yes Ornithorhynchus anatinus 69_5 Platypus 2 1
No Yes NCBI 2017_08 genome   154 87
No Yes STRING v9.0.5 (STRING)   17 9
No Yes Uniprot 2018_03 genome   64 37
No Yes PDB chains (SCOP 1.75) (PDB)   4 2
No Yes Protein Data Bank (all PDB sequenc)   4 2
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   12 12
No Yes TargetDB (Targets)   4 2

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